EnhancerDB
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  3. rs540402883[chr6:47105784]
Enhancers that have rs540402883[chr6:47105784]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47092105 47126155 enh23288
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr6 47105709 47106057 vista52200
VISTA
Transcript factors that have rs540402883[chr6:47105784]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47105630 47106156 STAT3 UCSC Txn Factor no Conserved 108540570
chr6 47105780 47105797 BCL6B JASPAR yes 70376102
chr6 47105780 47105797 BCL6B JASPAR yes 102002414
chr6 47105781 47105796 STAT1 JASPAR yes 70376103
chr6 47105781 47105796 STAT1 JASPAR yes 102002415
chr6 47105783 47105794 STAT1 JASPAR yes 70376104
chr6 47105783 47105794 STAT3 JASPAR yes 70376105
chr6 47105783 47105794 STAT1 JASPAR yes 102002416
chr6 47105783 47105794 STAT3 JASPAR yes 102002417
Genes associated with rs540402883[chr6:47105784], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More