EnhancerDB
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  3. rs540438677[chr7:101594196]
Enhancers that have rs540438677[chr7:101594196]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 101563425 101602635 enh9949
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540438677[chr7:101594196]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 101594192 101594211 RFX2 JASPAR yes 16814170
chr7 101594193 101594203 HMBOX1 JASPAR yes 16814171
chr7 101594196 101594212 RFX2 JASPAR yes 16814172
chr7 101594196 101594212 RFX3 JASPAR yes 16814173
chr7 101594196 101594212 RFX4 JASPAR yes 16814174
chr7 101594196 101594212 RFX5 JASPAR yes 16814175
Genes associated with rs540438677[chr7:101594196], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More