EnhancerDB
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  3. rs540466539[chr12:122031883]
Enhancers that have rs540466539[chr12:122031883]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122025285 122042415 enh15061
Bone Marrow (K562) Skin (Keratinocyte) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Uterus Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs540466539[chr12:122031883]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122028713 122032436 ZNF143 GTRD no Epithelial (MCF-7) 108065137
chr12 122028751 122032269 ZNF143 GTRD no Epithelial (MCF-7) 108065139
chr12 122031213 122032242 ZNF274 GTRD no Bone Marrow (K562) 21579251
chr12 122031215 122032107 ZNF274 GTRD no Bone Marrow (K562) 21579252
chr12 122031239 122032282 ZNF274 GTRD no Bone Marrow (K562) 21579253
chr12 122031299 122032291 ZNF274 GTRD no Bone Marrow (K562) 21579254
chr12 122031371 122032250 ZNF274 GTRD no Bone Marrow (K562) 21579255
chr12 122031374 122032212 ZNF274 GTRD no Bone Marrow (K562) 21579256
chr12 122031480 122032008 ZNF274 GTRD no Bone Marrow (K562) 21579257
chr12 122031492 122032244 ZNF274 GTRD no Bone Marrow (K562) 21579258
chr12 122031536 122032007 ZNF274 GTRD no Bone Marrow (K562) 21579259
chr12 122031541 122032071 ZNF274 GTRD no Bone Marrow (K562) 21579260
chr12 122031557 122032000 ZNF274 GTRD no Bone Marrow (K562) 21579262
chr12 122031560 122032053 ZNF274 GTRD no Bone Marrow (K562) 21579263
chr12 122031564 122032047 ZNF274 GTRD no Bone Marrow (K562) 21579264
chr12 122031583 122031997 ZNF274 GTRD no Bone Marrow (K562) 21579265
chr12 122031597 122032246 ZNF274 GTRD no Bone Marrow (K562) 21579266
chr12 122031669 122032061 ZNF274 GTRD no Bone Marrow (K562) 21579267
chr12 122031863 122031884 ZNF263 JASPAR yes 124231255
chr12 122031878 122031884 MZF1 JASPAR yes 124231256
Genes associated with rs540466539[chr12:122031883], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More