EnhancerDB
  1. Home
  2. SNP
  3. rs540474655[chr3:185468262]
Enhancers that have rs540474655[chr3:185468262]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 185460642 185522464 enh21175
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540474655[chr3:185468262]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 185468256 185468264 TBX5 JASPAR yes 8283913
chr3 185468256 185468265 ZEB1 JASPAR yes 8283914
chr3 185468259 185468264 USF2 TRANSFAC yes 8283915
Genes associated with rs540474655[chr3:185468262], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More