EnhancerDB
  1. Home
  2. SNP
  3. rs540480714[chr1:234880607]
Enhancers that have rs540480714[chr1:234880607]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234877045 234913055 enh12796
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540480714[chr1:234880607]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234878419 234883607 ZNF274 GTRD no Blood (GM12878) 107881636
chr1 234878974 234883568 ZNF274 GTRD no Blood (GM12878) 107881637
chr1 234878982 234883403 ZNF274 GTRD no Blood (GM12878) 107881638
chr1 234879051 234880925 ZNF274 GTRD no Bone Marrow (K562) 21397475
chr1 234880146 234880964 ZNF274 GTRD no Bone Marrow (K562) 21397482
chr1 234880307 234880957 ZNF274 GTRD no Bone Marrow (K562) 21397483
chr1 234880325 234881053 ZNF274 GTRD no Bone Marrow (K562) 21397484
chr1 234880457 234880813 ZNF274 GTRD no Bone Marrow (K562) 21397485
chr1 234880492 234880860 ZNF274 GTRD no Liver (HepG2) 21397486
chr1 234880498 234880740 ZNF274 GTRD no Cervix (HeLa-S3) 21397487
chr1 234880545 234880795 TCF7L2 GTRD no Colon (HCT116) 21397488
Genes associated with rs540480714[chr1:234880607], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More