EnhancerDB
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  3. rs540498949[chr3:149322304]
Enhancers that have rs540498949[chr3:149322304]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 149284825 149341275 enh21022
Brain (SK-N-MC) Liver Colon (HCT116) Uterus Kidney Stomach Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540498949[chr3:149322304]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 149322293 149322314 ZNF263 JASPAR yes 6512780
chr3 149322297 149322318 ZNF263 JASPAR yes 6512783
chr3 149322298 149322308 RORA JASPAR yes 6512784
chr3 149322300 149322315 LEF1 JASPAR yes 6512785
chr3 149322303 149322307 ESR1 TRANSFAC yes 6512786
Genes associated with rs540498949[chr3:149322304], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More