EnhancerDB
  1. Home
  2. SNP
  3. rs540613271[chr7:105437564]
Enhancers that have rs540613271[chr7:105437564]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 105426285 105452179 enh24395
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Adrenal Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs540613271[chr7:105437564]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 105437563 105437573 GCM2 JASPAR yes 16976281
chr7 105437563 105437574 GCM1 JASPAR yes 16976282
Genes associated with rs540613271[chr7:105437564], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More