EnhancerDB
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  3. rs540613977[chr17:43399835]
Enhancers that have rs540613977[chr17:43399835]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43363305 43400878 enh4428
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs540613977[chr17:43399835]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43397910 43400061 ZNF274 GTRD no Liver (HepG2) 21765054
chr17 43397910 43400061 ZNF274 GTRD no Liver (HepG2) 108264697
chr17 43397910 43400705 ZNF274 GTRD no Liver (HepG2) 21765055
chr17 43397910 43400705 ZNF274 GTRD no Liver (HepG2) 108264698
chr17 43397929 43403327 ZNF274 GTRD no Liver (HepG2) 21765058
chr17 43397929 43403327 ZNF274 GTRD no Liver (HepG2) 108264701
chr17 43397987 43400180 ZNF274 GTRD no Liver (HepG2) 21765060
chr17 43397987 43400180 ZNF274 GTRD no Liver (HepG2) 108264703
chr17 43397992 43403262 ZBTB33 GTRD no Lung (A549) 108264704
chr17 43398043 43403138 ZBTB33 GTRD no Lung (A549) 108264707
chr17 43398132 43401990 ZBTB33 GTRD no Lung (A549) 108264715
chr17 43398150 43400856 ZNF274 GTRD no Cervix (HeLa-S3) 21765066
chr17 43398150 43400856 ZNF274 GTRD no Cervix (HeLa-S3) 108264717
chr17 43398158 43400763 ZNF274 GTRD no Cervix (HeLa-S3) 21765067
chr17 43398158 43400763 ZNF274 GTRD no Cervix (HeLa-S3) 108264720
chr17 43398179 43400705 ZBTB33 GTRD no Lung (A549) 108264725
chr17 43398183 43400177 ZBTB33 GTRD no Lung (A549) 108264728
chr17 43398185 43400607 ZBTB33 GTRD no Lung (A549) 108264729
chr17 43398189 43400091 ZBTB33 GTRD no Lung (A549) 108264731
chr17 43398234 43400368 ZBTB33 GTRD no Lung (A549) 108264744
chr17 43398248 43400499 ZBTB33 GTRD no Lung (A549) 108264749
chr17 43398276 43400095 ZNF274 GTRD no Liver (HepG2) 21765092
chr17 43398276 43400095 ZNF274 GTRD no Liver (HepG2) 108264763
chr17 43398292 43400009 ZNF274 GTRD no Liver (HepG2) 21765103
chr17 43398292 43400009 ZNF274 GTRD no Liver (HepG2) 108264774
chr17 43398299 43400207 ZBTB33 GTRD no Lung (A549) 108264780
chr17 43398381 43399868 ZNF274 GTRD no Blood (GM12878) 21765139
chr17 43398381 43399868 ZNF274 GTRD no Blood (GM12878) 108264816
chr17 43398424 43400207 ZBTB33 GTRD no Lung (A549) 108264825
chr17 43398589 43399875 TCF7L2 GTRD no Colon (HCT116) 21765168
chr17 43398589 43399875 TCF7L2 GTRD no Colon (HCT116) 108264848
chr17 43398589 43400051 ZNF274 GTRD no Liver (HepG2) 21765169
chr17 43398589 43400051 ZNF274 GTRD no Liver (HepG2) 108264849
chr17 43398628 43400345 TCF7L2 GTRD no Colon (HCT116) 21765177
chr17 43399549 43400011 ZNF274 GTRD no Liver (HepG2) 21765224
chr17 43399616 43400526 TCF7L2 GTRD no Colon (HCT116) 21765226
chr17 43399638 43400358 ZNF143 GTRD no Epithelial (MCF-7) 21765227
chr17 43399666 43400605 TCF7L2 GTRD no Colon (HCT116) 21765228
chr17 43399672 43400295 ZNF143 GTRD no Epithelial (MCF-7) 21765229
chr17 43399681 43400551 TCF7L2 GTRD no Colon (HCT116) 21765230
chr17 43399830 43399845 STAT2 JASPAR yes 54444579
chr17 43399833 43399848 FOXP1 JASPAR yes 54444580
chr17 43399834 43399849 FOXP1 JASPAR yes 54444581
chr17 43399835 43399850 FOXP1 JASPAR yes 54444582
Genes associated with rs540613977[chr17:43399835], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More