EnhancerDB
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  3. rs540616257[chr1:43401794]
Enhancers that have rs540616257[chr1:43401794]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43394865 43408895 enh296
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs540616257[chr1:43401794]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43401578 43404928 POLR2A UCSC Txn Factor no Conserved 107803002
chr1 43401578 43404928 POLR2A UCSC Txn Factor no Conserved 107803003
chr1 43401789 43401799 TEAD1 JASPAR yes 28468092
chr1 43401789 43401799 TEAD4 JASPAR yes 28468093
chr1 43401790 43401798 TEAD3 JASPAR yes 28468094
chr1 43401793 43401798 ETS2 TRANSFAC yes 28468095
Genes associated with rs540616257[chr1:43401794], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More