EnhancerDB
  1. Home
  2. SNP
  3. rs540618589[chr12:46777432]
Enhancers that have rs540618589[chr12:46777432]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46774225 46791355 enh14675
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Esophagus Placenta Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540618589[chr12:46777432]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46776620 46778144 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541132
chr12 46776798 46777452 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541135
chr12 46776963 46777623 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541159
chr12 46777025 46777481 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541164
chr12 46777076 46777476 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21541166
chr12 46777092 46777562 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21541168
chr12 46777106 46777466 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541170
chr12 46777121 46777491 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21541172
chr12 46777135 46777599 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541173
chr12 46777137 46777473 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21541174
chr12 46777165 46777825 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541180
chr12 46777293 46777609 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21541188
chr12 46777339 46777735 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541189
chr12 46777356 46778131 ZNF274 GTRD no Liver (HepG2) 21541190
chr12 46777394 46777805 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21541191
chr12 46777394 46777809 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21541192
chr12 46777404 46777624 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21541193
chr12 46777413 46777434 ZNF263 JASPAR yes 120613292
chr12 46777414 46777435 ZNF263 JASPAR yes 120613294
chr12 46777418 46777439 ZNF263 JASPAR yes 120613298
chr12 46777421 46777442 ZNF263 JASPAR yes 120613300
chr12 46777424 46777434 MZF1 JASPAR yes 120613302
chr12 46777428 46777438 SP1 JASPAR yes 120613303
chr12 46777428 46777449 ZNF263 JASPAR yes 120613304
chr12 46777429 46777450 ZNF263 JASPAR yes 120613305
chr12 46777430 46777435 ETS2 TRANSFAC yes 120613306
Genes associated with rs540618589[chr12:46777432], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More