EnhancerDB
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  3. rs540629473[chr11:62212193]
Enhancers that have rs540629473[chr11:62212193]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 62190145 62243455 enh13972
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr11 62211626 62212261 vista10494
VISTA
Transcript factors that have rs540629473[chr11:62212193]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 62211980 62212290 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21488763
chr11 62211980 62212290 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107974421
chr11 62212037 62212287 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107974423
chr11 62212117 62212239 USF1 UCSC Txn Factor no Conserved 107974424
chr11 62212192 62212198 ATF1 TRANSFAC yes 39201692
chr11 62212192 62212198 ATF1 TRANSFAC yes 114080223
Genes associated with rs540629473[chr11:62212193], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More