EnhancerDB
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  3. rs540645239[chr16:89507411]
Enhancers that have rs540645239[chr16:89507411]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89499432 89527658 enh16907
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540645239[chr16:89507411]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89504869 89509425 ZNF274 GTRD no Bone Marrow (K562) 108226209
chr16 89505087 89509303 ZNF274 GTRD no Bone Marrow (K562) 108226210
chr16 89505120 89509396 ZNF274 GTRD no Bone Marrow (K562) 108226211
chr16 89506367 89509323 ZNF274 GTRD no Bone Marrow (K562) 108226212
chr16 89506497 89509194 TCF7L2 GTRD no Colon (HCT116) 21738545
chr16 89506497 89509194 TCF7L2 GTRD no Colon (HCT116) 108226213
chr16 89506535 89509361 ZNF274 GTRD no Bone Marrow (K562) 108226214
chr16 89506678 89509524 ZNF274 GTRD no Liver (HepG2) 21738546
chr16 89506678 89509524 ZNF274 GTRD no Liver (HepG2) 108226215
chr16 89506681 89509556 ZNF274 GTRD no Bone Marrow (K562) 108226216
chr16 89506682 89509211 ZNF274 GTRD no Bone Marrow (K562) 108226217
chr16 89506686 89509386 ZNF274 GTRD no Bone Marrow (K562) 108226218
chr16 89506694 89509424 ZNF274 GTRD no Blood (GM12878) 21738547
chr16 89506694 89509424 ZNF274 GTRD no Blood (GM12878) 108226219
chr16 89506695 89509421 ZNF274 GTRD no Liver (HepG2) 21738548
chr16 89506695 89509421 ZNF274 GTRD no Liver (HepG2) 108226220
chr16 89506695 89509423 ZNF274 GTRD no Liver (HepG2) 21738549
chr16 89506695 89509423 ZNF274 GTRD no Liver (HepG2) 108226221
chr16 89506700 89509405 ZNF274 GTRD no Liver (HepG2) 21738550
chr16 89506700 89509405 ZNF274 GTRD no Liver (HepG2) 108226222
chr16 89506710 89509424 ZNF274 GTRD no Bone Marrow (K562) 108226223
chr16 89506735 89509424 ZNF274 GTRD no Blood (GM12878) 21738551
chr16 89506735 89509424 ZNF274 GTRD no Blood (GM12878) 108226224
chr16 89506740 89509374 ZBTB33 GTRD no Lung (A549) 108226225
chr16 89506740 89509409 ZNF274 GTRD no Liver (HepG2) 21738552
chr16 89506740 89509409 ZNF274 GTRD no Liver (HepG2) 108226226
chr16 89506749 89509349 ZNF274 GTRD no Bone Marrow (K562) 108226227
chr16 89506757 89509335 ZNF274 GTRD no Bone Marrow (K562) 108226228
chr16 89506761 89509454 ZNF274 GTRD no Liver (HepG2) 21738553
chr16 89506761 89509454 ZNF274 GTRD no Liver (HepG2) 108226229
chr16 89506763 89509427 ZNF143 GTRD no Epithelial (MCF-7) 21738554
chr16 89506763 89509427 ZNF143 GTRD no Epithelial (MCF-7) 108226230
chr16 89506773 89509406 ZNF274 GTRD no Blood (GM12878) 21738555
chr16 89506773 89509406 ZNF274 GTRD no Blood (GM12878) 108226231
chr16 89506785 89509412 ZNF274 GTRD no Liver (HepG2) 21738556
chr16 89506785 89509412 ZNF274 GTRD no Liver (HepG2) 108226232
chr16 89506811 89509407 ZNF143 GTRD no Epithelial (MCF-7) 21738557
chr16 89506811 89509407 ZNF143 GTRD no Epithelial (MCF-7) 108226233
chr16 89506815 89509528 ZNF143 GTRD no Epithelial (MCF-7) 21738558
chr16 89506815 89509528 ZNF143 GTRD no Epithelial (MCF-7) 108226234
chr16 89506818 89510107 TCF7L2 GTRD no Colon (HCT116) 21738559
chr16 89506818 89510107 TCF7L2 GTRD no Colon (HCT116) 108226235
chr16 89506820 89509324 ZBTB33 GTRD no Lung (A549) 108226236
chr16 89506821 89508805 ZNF274 GTRD no Bone Marrow (K562) 108226237
chr16 89506821 89509387 ZBTB33 GTRD no Lung (A549) 108226238
chr16 89506823 89509407 ZNF143 GTRD no Epithelial (MCF-7) 21738560
chr16 89506823 89509407 ZNF143 GTRD no Epithelial (MCF-7) 108226239
chr16 89506824 89509415 ZNF143 GTRD no Epithelial (MCF-7) 21738561
chr16 89506824 89509415 ZNF143 GTRD no Epithelial (MCF-7) 108226240
chr16 89506824 89509431 ZBTB33 GTRD no Lung (A549) 108226241
chr16 89506845 89509358 ZNF143 GTRD no Epithelial (MCF-7) 21738562
chr16 89506845 89509358 ZNF143 GTRD no Epithelial (MCF-7) 108226242
chr16 89506858 89509411 ZBTB33 GTRD no Lung (A549) 108226243
chr16 89506860 89509776 ZNF143 GTRD no Epithelial (MCF-7) 21738563
chr16 89506860 89509776 ZNF143 GTRD no Epithelial (MCF-7) 108226244
chr16 89506870 89509415 ZNF274 GTRD no Bone Marrow (K562) 108226245
chr16 89506889 89509383 ZBTB33 GTRD no Lung (A549) 108226246
chr16 89506893 89509334 ZBTB33 GTRD no Lung (A549) 108226247
chr16 89506901 89509491 ZNF143 GTRD no Epithelial (MCF-7) 21738564
chr16 89506901 89509491 ZNF143 GTRD no Epithelial (MCF-7) 108226248
chr16 89506930 89509373 ZNF274 GTRD no Liver (HepG2) 21738565
chr16 89506930 89509373 ZNF274 GTRD no Liver (HepG2) 108226249
chr16 89506932 89509413 ZNF274 GTRD no Blood (GM12878) 21738566
chr16 89506932 89509413 ZNF274 GTRD no Blood (GM12878) 108226250
chr16 89506984 89509040 ZBTB33 GTRD no Lung (A549) 108226251
chr16 89506986 89509415 ZNF274 GTRD no Blood (GM12878) 21738567
chr16 89506986 89509415 ZNF274 GTRD no Blood (GM12878) 108226252
chr16 89506988 89509411 ZNF143 GTRD no Epithelial (MCF-7) 21738568
chr16 89506988 89509411 ZNF143 GTRD no Epithelial (MCF-7) 108226253
chr16 89507007 89509343 ZBTB33 GTRD no Lung (A549) 108226254
chr16 89507029 89508591 ZNF274 GTRD no Liver (HepG2) 21738569
chr16 89507029 89508591 ZNF274 GTRD no Liver (HepG2) 108226255
chr16 89507066 89509380 ZBTB33 GTRD no Lung (A549) 108226256
chr16 89507098 89509346 ZNF274 GTRD no Blood (GM12878) 21738570
chr16 89507098 89509346 ZNF274 GTRD no Blood (GM12878) 108226257
chr16 89507099 89509364 ZNF274 GTRD no Blood (GM12878) 21738571
chr16 89507099 89509364 ZNF274 GTRD no Blood (GM12878) 108226258
chr16 89507129 89509379 ZNF274 GTRD no Liver (HepG2) 21738572
chr16 89507129 89509379 ZNF274 GTRD no Liver (HepG2) 108226259
chr16 89507175 89509424 ZBTB33 GTRD no Lung (A549) 108226260
chr16 89507217 89509281 ZNF274 GTRD no Bone Marrow (K562) 108226261
chr16 89507220 89509161 TCF7L2 GTRD no Colon (HCT116) 21738573
chr16 89507220 89509161 TCF7L2 GTRD no Colon (HCT116) 108226262
chr16 89507260 89509082 TCF7L2 GTRD no Colon (HCT116) 21738574
chr16 89507260 89509082 TCF7L2 GTRD no Colon (HCT116) 108226263
chr16 89507288 89508823 ZNF274 GTRD no Blood (GM12878) 21738575
chr16 89507288 89508823 ZNF274 GTRD no Blood (GM12878) 108226264
chr16 89507296 89509312 ZNF274 GTRD no Cervix (HeLa-S3) 21738576
chr16 89507296 89509312 ZNF274 GTRD no Cervix (HeLa-S3) 108226265
chr16 89507296 89509445 ZNF274 GTRD no Bone Marrow (K562) 108226266
chr16 89507301 89508735 ZNF274 GTRD no Bone Marrow (K562) 108226267
chr16 89507307 89509470 ZNF143 GTRD no Epithelial (MCF-7) 21738577
chr16 89507307 89509470 ZNF143 GTRD no Epithelial (MCF-7) 108226268
chr16 89507313 89509247 ZNF143 GTRD no Epithelial (MCF-7) 21738578
chr16 89507313 89509247 ZNF143 GTRD no Epithelial (MCF-7) 108226269
chr16 89507313 89509376 ZNF274 GTRD no Bone Marrow (K562) 108226270
chr16 89507314 89509067 ZBTB33 GTRD no Brain (SK-N-SH) 21738579
chr16 89507314 89509067 ZBTB33 GTRD no Brain (SK-N-SH) 108226271
chr16 89507317 89509221 ZNF274 GTRD no Bone Marrow (K562) 108226272
chr16 89507317 89509239 ZNF274 GTRD no Bone Marrow (K562) 108226273
chr16 89507323 89509228 ZNF274 GTRD no Liver (HepG2) 21738580
chr16 89507323 89509228 ZNF274 GTRD no Liver (HepG2) 108226274
chr16 89507328 89509129 ZNF274 GTRD no Liver (HepG2) 21738581
chr16 89507328 89509129 ZNF274 GTRD no Liver (HepG2) 108226275
chr16 89507331 89509567 ZNF143 GTRD no Epithelial (MCF-7) 21738582
chr16 89507331 89509567 ZNF143 GTRD no Epithelial (MCF-7) 108226276
chr16 89507339 89509445 ZNF143 GTRD no Epithelial (MCF-7) 21738583
chr16 89507339 89509445 ZNF143 GTRD no Epithelial (MCF-7) 108226277
chr16 89507348 89509405 ZNF274 GTRD no Blood (GM12878) 21738584
chr16 89507348 89509405 ZNF274 GTRD no Blood (GM12878) 108226278
chr16 89507367 89509174 TCF7L2 GTRD no Colon (HCT116) 21738585
chr16 89507367 89509174 TCF7L2 GTRD no Colon (HCT116) 108226279
chr16 89507367 89509247 ZNF274 GTRD no Bone Marrow (K562) 108226280
chr16 89507376 89509154 TCF7L2 GTRD no Colon (HCT116) 21738586
chr16 89507376 89509154 TCF7L2 GTRD no Colon (HCT116) 108226281
chr16 89507384 89508966 ZBTB33 GTRD no Lung (A549) 108226282
chr16 89507388 89509283 ZNF274 GTRD no Bone Marrow (K562) 108226283
chr16 89507389 89509009 TCF7L2 GTRD no Colon (HCT116) 21738587
chr16 89507389 89509009 TCF7L2 GTRD no Colon (HCT116) 108226284
chr16 89507392 89509156 ZNF143 GTRD no Epithelial (MCF-7) 21738588
chr16 89507392 89509156 ZNF143 GTRD no Epithelial (MCF-7) 108226285
chr16 89507394 89508041 ZBTB33 GTRD no Lung (A549) 108226286
chr16 89507400 89509286 ZNF274 GTRD no Bone Marrow (K562) 108226287
chr16 89507405 89507419 PLAG1 JASPAR yes 12344609
chr16 89507409 89509463 ZNF143 GTRD no Epithelial (MCF-7) 21738589
chr16 89507409 89509463 ZNF143 GTRD no Epithelial (MCF-7) 108226288
chr16 89507410 89508470 ZBTB33 GTRD no Lung (A549) 108226289
chr16 89507411 89509288 ZNF143 GTRD no Epithelial (MCF-7) 21738590
chr16 89507411 89509288 ZNF143 GTRD no Epithelial (MCF-7) 108226290
Genes associated with rs540645239[chr16:89507411], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More