EnhancerDB
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  3. rs540645978[chr16:89501929]
Enhancers that have rs540645978[chr16:89501929]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89499432 89527658 enh16907
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540645978[chr16:89501929]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89501916 89501934 ESR1 JASPAR yes 12343857
chr16 89501918 89501933 ESR2 JASPAR yes 12343858
chr16 89501918 89501938 ESR1 JASPAR yes 12343859
Genes associated with rs540645978[chr16:89501929], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More