EnhancerDB
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Enhancers that have rs540660243[chr12:109232549]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109230004 109245900 enh14979
Bone Marrow (K562) Brain (SK-N-MC) Adrenal Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540660243[chr12:109232549]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109231069 109232687 POLR2A UCSC Txn Factor no Conserved 108057682
chr12 109231720 109232607 TCF7L2 UCSC Txn Factor no Conserved 108057684
chr12 109231914 109232648 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571790
chr12 109231914 109232648 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057689
chr12 109231959 109232643 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571791
chr12 109231959 109232643 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057690
chr12 109231986 109232562 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571792
chr12 109231986 109232562 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057691
chr12 109231986 109232646 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571793
chr12 109231986 109232646 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057692
chr12 109231995 109232571 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108057695
chr12 109232001 109232591 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571797
chr12 109232001 109232591 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057697
chr12 109232011 109232607 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21571799
chr12 109232011 109232607 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108057699
chr12 109232022 109232652 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571800
chr12 109232022 109232652 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057700
chr12 109232024 109232674 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571801
chr12 109232024 109232674 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057701
chr12 109232033 109232549 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571802
chr12 109232033 109232549 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057704
chr12 109232039 109232635 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571803
chr12 109232039 109232635 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057706
chr12 109232043 109232553 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571805
chr12 109232043 109232553 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057708
chr12 109232053 109232563 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571806
chr12 109232053 109232563 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057709
chr12 109232066 109232586 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108057710
chr12 109232118 109232554 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21571821
chr12 109232118 109232554 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108057728
chr12 109232132 109232549 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571825
chr12 109232132 109232549 RUNX3 UCSC Txn Factor no Conserved 108057734
chr12 109232132 109232549 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057735
chr12 109232134 109232967 ZNF143 GTRD no Epithelial (MCF-7) 108057738
chr12 109232140 109232616 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571830
chr12 109232140 109232616 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057743
chr12 109232141 109232597 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571831
chr12 109232141 109232597 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057744
chr12 109232162 109232659 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571840
chr12 109232162 109232659 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057757
chr12 109232203 109232559 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571861
chr12 109232203 109232559 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057788
chr12 109232212 109232588 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571866
chr12 109232212 109232588 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057795
chr12 109232234 109232551 EBF1 UCSC Txn Factor no Conserved 108057809
chr12 109232244 109232754 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571882
chr12 109232244 109232754 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057812
chr12 109232532 109232550 NR3C1 JASPAR yes 123625442
chr12 109232534 109232552 NR3C1 JASPAR yes 123625443
chr12 109232542 109232559 BCL6B JASPAR yes 123625444
chr12 109232544 109232550 ETS1 JASPAR yes 123625445
chr12 109232544 109232550 SPI1 JASPAR yes 123625446
Genes associated with rs540660243[chr12:109232549], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More