EnhancerDB
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  3. rs540671563[chr2:75067585]
Enhancers that have rs540671563[chr2:75067585]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 75065325 75080614 enh5655
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540671563[chr2:75067585]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 75067576 75067587 ELK4 JASPAR yes 75108096
chr2 75067576 75067587 FLI1 JASPAR yes 75108097
chr2 75067576 75067589 ELF3 JASPAR yes 75108098
chr2 75067577 75067587 ELK1 JASPAR yes 75108099
chr2 75067577 75067587 ELK3 JASPAR yes 75108100
chr2 75067577 75067587 ERF JASPAR yes 75108101
chr2 75067577 75067587 ERG JASPAR yes 75108102
chr2 75067577 75067587 ETS1 JASPAR yes 75108103
chr2 75067577 75067587 ETV1 JASPAR yes 75108104
chr2 75067577 75067587 ETV3 JASPAR yes 75108105
chr2 75067577 75067587 ETV4 JASPAR yes 75108106
chr2 75067577 75067587 ETV5 JASPAR yes 75108107
chr2 75067577 75067587 ETV6 JASPAR yes 75108108
chr2 75067577 75067587 FEV JASPAR yes 75108109
chr2 75067577 75067587 FLI1 JASPAR yes 75108110
chr2 75067577 75067588 ELF5 JASPAR yes 75108111
chr2 75067577 75067588 ETV2 JASPAR yes 75108112
chr2 75067577 75067588 SPDEF JASPAR yes 75108113
chr2 75067577 75067589 EHF JASPAR yes 75108114
chr2 75067577 75067589 ELF1 JASPAR yes 75108115
chr2 75067577 75067589 ELF4 JASPAR yes 75108116
chr2 75067577 75067590 ELF1 JASPAR yes 75108117
chr2 75067577 75067591 SPI1 JASPAR yes 75108118
chr2 75067577 75067591 SPIC JASPAR yes 75108119
chr2 75067578 75067586 FEV JASPAR yes 75108120
chr2 75067578 75067587 ELK4 JASPAR yes 75108121
chr2 75067578 75067592 IRF8 JASPAR yes 75108122
chr2 75067579 75067585 ETS1 JASPAR yes 75108123
chr2 75067579 75067585 SPI1 JASPAR yes 75108124
chr2 75067579 75067589 ELK1 JASPAR yes 75108125
Genes associated with rs540671563[chr2:75067585], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More