EnhancerDB
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  3. rs540717896[chr2:238219884]
Enhancers that have rs540717896[chr2:238219884]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238203445 238226755 enh19391
Skin (Keratinocyte) Kidney Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Lung Stomach Placenta Thyroid Uterus Muscle (Myoblast) Breast Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs540717896[chr2:238219884]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238219878 238219893 FOXP1 JASPAR yes 82103709
chr2 238219879 238219900 IRF1 JASPAR yes 82103710
chr2 238219880 238219885 ETS2 TRANSFAC yes 82103711
chr2 238219880 238219901 IRF1 JASPAR yes 82103712
Genes associated with rs540717896[chr2:238219884], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More