EnhancerDB
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  3. rs540746930[chr16:88842148]
Enhancers that have rs540746930[chr16:88842148]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540746930[chr16:88842148]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 21736969
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223440
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223441
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223442
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223443
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 21736971
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223445
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223446
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223447
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223448
chr16 88837083 88844010 ZNF143 GTRD no Epithelial (MCF-7) 21736980
chr16 88837083 88844010 ZNF143 GTRD no Epithelial (MCF-7) 108223459
chr16 88837083 88844010 ZNF143 GTRD no Epithelial (MCF-7) 108223460
chr16 88837083 88844010 ZNF143 GTRD no Epithelial (MCF-7) 108223461
chr16 88837118 88842457 ZNF143 GTRD no Epithelial (MCF-7) 21736984
chr16 88837118 88842457 ZNF143 GTRD no Epithelial (MCF-7) 108223467
chr16 88837118 88842457 ZNF143 GTRD no Epithelial (MCF-7) 108223468
chr16 88837118 88842457 ZNF143 GTRD no Epithelial (MCF-7) 108223469
chr16 88842133 88842148 FOXP1 JASPAR yes 12303077
chr16 88842133 88842154 IRF1 JASPAR yes 12303078
chr16 88842134 88842149 FOXP1 JASPAR yes 12303079
chr16 88842134 88842155 IRF1 JASPAR yes 12303080
chr16 88842135 88842150 FOXP1 JASPAR yes 12303081
chr16 88842135 88842156 IRF1 JASPAR yes 12303082
chr16 88842136 88842151 FOXP1 JASPAR yes 12303083
chr16 88842136 88842157 IRF1 JASPAR yes 12303084
chr16 88842137 88842152 FOXP1 JASPAR yes 12303085
chr16 88842137 88842158 IRF1 JASPAR yes 12303086
chr16 88842138 88842153 FOXP1 JASPAR yes 12303087
chr16 88842140 88842155 FOXP1 JASPAR yes 12303088
chr16 88842141 88842162 IRF1 JASPAR yes 12303089
chr16 88842142 88842157 FOXP1 JASPAR yes 12303090
chr16 88842142 88842163 IRF1 JASPAR yes 12303091
chr16 88842146 88842167 IRF1 JASPAR yes 12303092
chr16 88842147 88842162 FOXP1 JASPAR yes 12303093
chr16 88842147 88842168 IRF1 JASPAR yes 12303094
chr16 88842148 88842169 IRF1 JASPAR yes 12303095
Genes associated with rs540746930[chr16:88842148], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More