EnhancerDB
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  3. rs540776485[chr1:19773633]
Enhancers that have rs540776485[chr1:19773633]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540776485[chr1:19773633]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19773623 19773644 IRF1 JASPAR yes 27191487
chr1 19773625 19773640 PRDM1 JASPAR yes 27191488
chr1 19773629 19773650 ZNF263 JASPAR yes 27191489
chr1 19773632 19773653 ZNF263 JASPAR yes 27191490
Genes associated with rs540776485[chr1:19773633], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More