EnhancerDB
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  3. rs540813502[chr17:80513759]
Enhancers that have rs540813502[chr17:80513759]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540813502[chr17:80513759]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80513741 80513759 IRF2 JASPAR yes 56374417
chr17 80513758 80513773 FOXP1 JASPAR yes 56374419
chr17 80513759 80513774 FOXP1 JASPAR yes 56374420
chr17 80513759 80513780 IRF1 JASPAR yes 56374421
Genes associated with rs540813502[chr17:80513759], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More