EnhancerDB
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  3. rs540817739[chr1:16113925]
Enhancers that have rs540817739[chr1:16113925]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16111145 16132915 enh11541
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540817739[chr1:16113925]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16113911 16113926 TFAP2A JASPAR yes 27000805
chr1 16113911 16113926 TFAP2C JASPAR yes 27000806
chr1 16113914 16113925 EBF1 JASPAR yes 27000807
chr1 16113914 16113926 TFAP2A JASPAR yes 27000808
chr1 16113914 16113926 TFAP2B JASPAR yes 27000809
chr1 16113914 16113926 TFAP2C JASPAR yes 27000810
chr1 16113916 16113925 TFAP2A JASPAR yes 27000811
Genes associated with rs540817739[chr1:16113925], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More