EnhancerDB
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  3. rs540822906[chr12:53963638]
Enhancers that have rs540822906[chr12:53963638]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53952154 53966435 enh2368
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs540822906[chr12:53963638]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53963631 53963646 MEF2A JASPAR yes 120992241
chr12 53963632 53963647 MEF2C JASPAR yes 120992242
chr12 53963633 53963645 MEF2B JASPAR yes 120992243
chr12 53963633 53963645 MEF2D JASPAR yes 120992244
chr12 53963635 53963639 YY1 TRANSFAC yes 120992245
Genes associated with rs540822906[chr12:53963638], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More