EnhancerDB
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  3. rs540853683[chr1:19735003]
Enhancers that have rs540853683[chr1:19735003]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540853683[chr1:19735003]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19734118 19735289 ZNF274 GTRD no Bone Marrow (K562) 107802301
chr1 19734999 19735004 GATA1 TRANSFAC yes 27186589
Genes associated with rs540853683[chr1:19735003], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More