EnhancerDB
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  3. rs540867706[chr5:172278468]
Enhancers that have rs540867706[chr5:172278468]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540867706[chr5:172278468]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172278462 172278473 CEBPB JASPAR yes 67834727
chr5 172278463 172278473 CEBPB JASPAR yes 67834728
chr5 172278463 172278473 CEBPD JASPAR yes 67834729
chr5 172278463 172278473 CEBPE JASPAR yes 67834730
chr5 172278463 172278473 CEBPG JASPAR yes 67834731
Genes associated with rs540867706[chr5:172278468], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More