EnhancerDB
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  3. rs540871724[chr16:25002383]
Enhancers that have rs540871724[chr16:25002383]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 24992965 25014102 enh3954
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540871724[chr16:25002383]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 25002381 25002385 H1TF2 TRANSFAC yes 10093014
chr16 25002381 25002385 NFE TRANSFAC yes 10093015
chr16 25002381 25002385 SRF TRANSFAC yes 10093016
Genes associated with rs540871724[chr16:25002383], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More