EnhancerDB
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  3. rs540892004[chr17:79547019]
Enhancers that have rs540892004[chr17:79547019]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79539405 79553215 enh32380
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs540892004[chr17:79547019]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79546234 79547121 TCF7L2 GTRD no Colon (HCT116) 21798208
chr17 79546234 79547121 TCF7L2 GTRD no Colon (HCT116) 108310083
chr17 79546920 79547803 TCF7L2 GTRD no Colon (HCT116) 21798209
chr17 79546920 79547803 TCF7L2 GTRD no Colon (HCT116) 108310084
Genes associated with rs540892004[chr17:79547019], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More