EnhancerDB
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  3. rs540911569[chr13:113359992]
Enhancers that have rs540911569[chr13:113359992]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 113356925 113401095 enh15512
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs540911569[chr13:113359992]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 113359986 113359995 SNAI2 JASPAR yes 60427568
chr13 113359986 113359996 ID4 JASPAR yes 60427569
chr13 113359986 113359996 MSC JASPAR yes 60427570
chr13 113359986 113359996 TCF3 JASPAR yes 60427571
chr13 113359986 113359996 TCF4 JASPAR yes 60427572
Genes associated with rs540911569[chr13:113359992], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More