EnhancerDB
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  3. rs540924339[chr11:122535312]
Enhancers that have rs540924339[chr11:122535312]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122527985 122597555 enh2064
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs540924339[chr11:122535312]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 122535304 122535319 TFAP2A JASPAR yes 42016272
chr11 122535308 122535317 TFAP2A JASPAR yes 42016273
chr11 122535312 122535317 SP1 TRANSFAC yes 42016274
Genes associated with rs540924339[chr11:122535312], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More