EnhancerDB
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  3. rs540928350[chr10:29913476]
Enhancers that have rs540928350[chr10:29913476]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 29894589 29921854 enh13094
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Breast Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs540928350[chr10:29913476]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 29913460 29913481 IRF1 JASPAR yes 126333072
chr10 29913462 29913482 RREB1 JASPAR yes 126333073
chr10 29913465 29913477 IRF1 JASPAR yes 126333074
chr10 29913465 29913480 FOXP1 JASPAR yes 126333075
chr10 29913466 29913487 IRF1 JASPAR yes 126333076
chr10 29913467 29913487 RREB1 JASPAR yes 126333077
Genes associated with rs540928350[chr10:29913476], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More