EnhancerDB
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  3. rs541006213[chr6:44023481]
Enhancers that have rs541006213[chr6:44023481]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541006213[chr6:44023481]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44023461 44023482 IRF1 JASPAR yes 101818328
chr6 44023462 44023483 IRF1 JASPAR yes 101818329
chr6 44023467 44023482 MEF2A JASPAR yes 101818332
chr6 44023468 44023483 FOXP1 JASPAR yes 101818333
chr6 44023468 44023483 MEF2C JASPAR yes 101818334
chr6 44023468 44023489 IRF1 JASPAR yes 101818335
chr6 44023469 44023481 FOXC2 JASPAR yes 101818336
chr6 44023469 44023481 MEF2A JASPAR yes 101818337
chr6 44023469 44023481 MEF2B JASPAR yes 101818338
chr6 44023469 44023481 MEF2D JASPAR yes 101818339
chr6 44023472 44023484 IRF1 JASPAR yes 101818342
chr6 44023473 44023488 MEF2A JASPAR yes 101818343
chr6 44023474 44023489 FOXP1 JASPAR yes 101818344
chr6 44023474 44023489 MEF2C JASPAR yes 101818345
chr6 44023475 44023487 FOXC2 JASPAR yes 101818346
chr6 44023475 44023487 MEF2A JASPAR yes 101818347
chr6 44023475 44023487 MEF2B JASPAR yes 101818348
chr6 44023475 44023487 MEF2D JASPAR yes 101818349
chr6 44023476 44023486 MEF2A JASPAR yes 101818350
chr6 44023477 44023481 YY1 TRANSFAC yes 101818351
chr6 44023478 44023494 POU4F3 JASPAR yes 101818352
chr6 44023479 44023494 FOXA1 JASPAR yes 101818353
chr6 44023480 44023492 FOXI1 JASPAR yes 101818354
chr6 44023480 44023494 POU4F1 JASPAR yes 101818355
chr6 44023480 44023495 FOXP1 JASPAR yes 101818356
chr6 44023480 44023495 HNF1A JASPAR yes 101818357
chr6 44023481 44023493 FOXC2 JASPAR yes 101818358
chr6 44023481 44023495 ONECUT2 JASPAR yes 101818359
chr6 44023481 44023495 ONECUT3 JASPAR yes 101818360
Genes associated with rs541006213[chr6:44023481], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More