EnhancerDB
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  3. rs541052462[chr12:109242229]
Enhancers that have rs541052462[chr12:109242229]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109230004 109245900 enh14979
Bone Marrow (K562) Brain (SK-N-MC) Adrenal Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs541052462[chr12:109242229]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109242215 109242230 JUND JASPAR yes 123626780
chr12 109242219 109242229 SREBF1 JASPAR yes 123626781
chr12 109242219 109242229 SREBF2 JASPAR yes 123626782
chr12 109242225 109242234 THAP1 JASPAR yes 123626783
chr12 109242226 109242232 YY1 JASPAR yes 123626784
Genes associated with rs541052462[chr12:109242229], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More