EnhancerDB
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  3. rs541142209[chr16:85263158]
Enhancers that have rs541142209[chr16:85263158]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541142209[chr16:85263158]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85261386 85263193 ZNF274 GTRD no Bone Marrow (K562) 21721652
chr16 85261395 85263673 ZNF274 GTRD no Bone Marrow (K562) 21721653
chr16 85261513 85263489 ZNF274 GTRD no Bone Marrow (K562) 21721654
chr16 85261572 85263290 ZNF274 GTRD no Bone Marrow (K562) 21721657
chr16 85261723 85263573 ZNF274 GTRD no Bone Marrow (K562) 21721662
chr16 85261814 85263256 ZNF274 GTRD no Bone Marrow (K562) 21721668
chr16 85262025 85263367 ZNF274 GTRD no Bone Marrow (K562) 21721674
chr16 85262082 85263282 ZNF274 GTRD no Bone Marrow (K562) 21721680
chr16 85262202 85263298 ZNF274 GTRD no Bone Marrow (K562) 21721687
chr16 85262658 85263506 TCF7L2 GTRD no Colon (HCT116) 21721695
chr16 85262795 85263295 ZNF274 GTRD no Bone Marrow (K562) 21721696
chr16 85262838 85263472 ZNF274 GTRD no Bone Marrow (K562) 21721697
chr16 85262932 85263298 ZNF274 GTRD no Bone Marrow (K562) 21721698
chr16 85262967 85263313 ZNF274 GTRD no Bone Marrow (K562) 21721699
chr16 85263152 85263163 USF2 JASPAR yes 12035735
chr16 85263153 85263163 TFEC JASPAR yes 12035736
Genes associated with rs541142209[chr16:85263158], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More