EnhancerDB
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  3. rs541235141[chr2:232523746]
Enhancers that have rs541235141[chr2:232523746]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541235141[chr2:232523746]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232523743 232523758 FOXP1 JASPAR yes 81732764
chr2 232523744 232523759 FOXP1 JASPAR yes 81732765
chr2 232523745 232523760 FOXP1 JASPAR yes 81732766
chr2 232523745 232523766 IRF1 JASPAR yes 81732767
chr2 232523746 232523761 FOXP1 JASPAR yes 81732768
chr2 232523746 232523767 IRF1 JASPAR yes 81732769
Genes associated with rs541235141[chr2:232523746], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More