EnhancerDB
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  3. rs541245[chr11:57545948]
Enhancers that have rs541245[chr11:57545948]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 57536385 57549074 enh13938
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541245[chr11:57545948]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 57545514 57546130 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21484464
chr11 57545514 57546130 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107970847
chr11 57545567 57546183 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107970848
chr11 57545662 57546298 TCF7L2 GTRD no Colon (HCT116) 21484465
chr11 57545662 57546298 TCF7L2 GTRD no Colon (HCT116) 107970849
chr11 57545706 57546335 TCF7L2 GTRD no Colon (HCT116) 21484466
chr11 57545706 57546335 TCF7L2 GTRD no Colon (HCT116) 107970850
chr11 57545756 57546534 TCF7L2 GTRD no Colon (HCT116) 21484467
chr11 57545756 57546534 TCF7L2 GTRD no Colon (HCT116) 107970851
chr11 57545767 57546163 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21484468
chr11 57545767 57546163 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107970852
chr11 57545829 57546405 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21484469
chr11 57545829 57546405 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107970853
chr11 57545830 57546294 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21484470
chr11 57545830 57546294 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107970854
chr11 57545835 57546526 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21484471
chr11 57545835 57546526 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107970855
chr11 57545835 57546528 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21484472
chr11 57545835 57546528 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107970856
chr11 57545835 57546605 POLR2A UCSC Txn Factor no Conserved 107970857
chr11 57545860 57546456 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21484473
chr11 57545860 57546456 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107970858
chr11 57545914 57546354 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21484474
chr11 57545914 57546354 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107970859
chr11 57545930 57546250 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21484475
chr11 57545930 57546250 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107970860
chr11 57545934 57546304 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21484476
chr11 57545934 57546304 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107970861
chr11 57545939 57546383 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21484477
chr11 57545939 57546383 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107970862
chr11 57545939 57546409 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21484478
chr11 57545939 57546409 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107970863
chr11 57545940 57545949 NFIX JASPAR yes 39017490
chr11 57545940 57545950 NFIA JASPAR yes 39017491
chr11 57545942 57545948 NFIC JASPAR yes 39017492
chr11 57545947 57546277 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21484479
chr11 57545947 57546277 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107970864
Genes associated with rs541245[chr11:57545948], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More