EnhancerDB
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  3. rs541287650[chr1:181074164]
Enhancers that have rs541287650[chr1:181074164]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 181061310 181091955 enh12430
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541287650[chr1:181074164]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 181073111 181074411 ZNF274 GTRD no Bone Marrow (K562) 21354426
chr1 181073111 181074411 ZNF274 GTRD no Bone Marrow (K562) 107848365
chr1 181073126 181074349 ZBTB33 GTRD no Lung (A549) 107848366
chr1 181073251 181074386 ZBTB33 GTRD no Lung (A549) 107848367
chr1 181073294 181074337 ZBTB33 GTRD no Brain (SK-N-SH) 21354429
chr1 181073324 181074348 ZBTB33 GTRD no Brain (SK-N-SH) 21354431
chr1 181073338 181074299 ZBTB33 GTRD no Brain (SK-N-SH) 21354432
chr1 181073369 181074205 ZBTB33 GTRD no Brain (SK-N-SH) 21354435
chr1 181073390 181074210 ZBTB33 GTRD no Brain (SK-N-SH) 21354436
chr1 181073422 181074186 ZBTB33 GTRD no Brain (SK-N-SH) 21354439
chr1 181073425 181074255 ZBTB33 GTRD no Brain (SK-N-SH) 21354440
chr1 181073436 181074164 ZNF143 GTRD no Epithelial (MCF-7) 21354442
chr1 181073446 181074216 ZBTB33 GTRD no Brain (SK-N-SH) 21354445
chr1 181073452 181074326 ZBTB33 GTRD no Brain (SK-N-SH) 21354447
chr1 181073465 181074180 ZBTB33 GTRD no Brain (SK-N-SH) 21354449
chr1 181073465 181074255 ZBTB33 GTRD no Brain (SK-N-SH) 21354450
chr1 181073470 181074179 ZNF274 GTRD no Cervix (HeLa-S3) 21354453
chr1 181073482 181074254 ZBTB33 GTRD no Brain (SK-N-SH) 21354457
chr1 181073486 181074168 ZBTB33 GTRD no Brain (SK-N-SH) 21354458
chr1 181073506 181074194 ZBTB33 GTRD no Brain (SK-N-SH) 21354461
chr1 181073546 181074190 ZBTB33 GTRD no Brain (SK-N-SH) 21354464
chr1 181073570 181074296 ZBTB33 GTRD no Brain (SK-N-SH) 21354469
chr1 181073628 181075323 POLR2A UCSC Txn Factor no Conserved 107848368
chr1 181073668 181074358 ZBTB33 GTRD no Brain (SK-N-SH) 21354475
chr1 181073668 181074358 ZBTB33 GTRD no Brain (SK-N-SH) 107848369
chr1 181073681 181074341 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21354477
chr1 181073726 181074250 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354480
chr1 181073729 181074239 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354481
chr1 181073773 181074173 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21354483
chr1 181073826 181074282 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354486
chr1 181073851 181074422 TCF7L2 GTRD no Colon (HCT116) 21354489
chr1 181073851 181074422 TCF7L2 GTRD no Colon (HCT116) 107848370
chr1 181073864 181074368 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354490
chr1 181073864 181074368 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107848371
chr1 181073877 181074626 TCF7L2 UCSC Txn Factor no Conserved 107848372
chr1 181073886 181074322 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21354492
chr1 181073894 181074606 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354493
chr1 181073894 181074606 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107848373
chr1 181073930 181074506 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107848374
chr1 181073932 181074377 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21354495
chr1 181073932 181074377 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107848375
chr1 181073934 181074552 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354496
chr1 181073934 181074552 PHF8 UCSC Txn Factor no Conserved 107848376
chr1 181073934 181074552 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107848377
chr1 181073937 181074537 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107848378
chr1 181073940 181074433 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21354497
chr1 181073940 181074433 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107848379
chr1 181073945 181074441 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21354498
chr1 181073945 181074441 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107848380
chr1 181073973 181074193 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21354499
chr1 181073975 181074635 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21354500
chr1 181073975 181074635 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107848381
chr1 181074003 181074579 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354502
chr1 181074003 181074579 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107848382
chr1 181074024 181074313 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21354503
chr1 181074071 181074576 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21354504
chr1 181074071 181074576 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107848383
chr1 181074071 181074625 E2F1 UCSC Txn Factor no Conserved 107848384
chr1 181074073 181074449 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107848385
chr1 181074115 181074605 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354505
chr1 181074115 181074605 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107848386
chr1 181074118 181074634 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21354506
chr1 181074118 181074634 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107848387
chr1 181074132 181074642 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21354507
chr1 181074132 181074642 E2F6 UCSC Txn Factor no Conserved 107848388
chr1 181074132 181074642 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107848389
chr1 181074151 181074169 IRF2 JASPAR yes 33553207
chr1 181074154 181074169 STAT2 JASPAR yes 33553208
chr1 181074154 181074644 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107848390
chr1 181074155 181074169 STAT1 JASPAR yes 33553209
chr1 181074157 181074178 ZNF263 JASPAR yes 33553210
chr1 181074160 181074690 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21354508
chr1 181074160 181074690 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107848391
chr1 181074161 181074165 YY1 TRANSFAC yes 33553211
chr1 181074163 181074627 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21354509
chr1 181074163 181074627 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107848392
Genes associated with rs541287650[chr1:181074164], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More