EnhancerDB
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  3. rs541289194[chr6:44030891]
Enhancers that have rs541289194[chr6:44030891]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541289194[chr6:44030891]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44030884 44030891 SP1 TRANSFAC yes 101819439
chr6 44030885 44030896 E2F1 JASPAR yes 101819440
chr6 44030886 44030891 SP1 TRANSFAC yes 101819441
Genes associated with rs541289194[chr6:44030891], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More