EnhancerDB
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  3. rs541297774[chr17:28049291]
Enhancers that have rs541297774[chr17:28049291]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 28029886 28064015 enh4330
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs541297774[chr17:28049291]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 28049201 28049751 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749552
chr17 28049201 28049751 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248021
chr17 28049288 28049303 FOXP1 JASPAR yes 53753524
chr17 28049289 28049304 FOXP1 JASPAR yes 53753525
chr17 28049290 28049305 FOXP1 JASPAR yes 53753526
chr17 28049290 28049311 IRF1 JASPAR yes 53753527
chr17 28049291 28049306 FOXP1 JASPAR yes 53753528
chr17 28049291 28049312 IRF1 JASPAR yes 53753529
Genes associated with rs541297774[chr17:28049291], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More