EnhancerDB
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  3. rs541320635[chr16:29170673]
Enhancers that have rs541320635[chr16:29170673]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29150646 29173335 enh16623
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (T-cell) Lung (A549) Stomach Placenta Uterus Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs541320635[chr16:29170673]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29170341 29171032 ZBTB33 GTRD no Brain (SK-N-SH) 21701846
chr16 29170341 29171032 ZBTB33 GTRD no Brain (SK-N-SH) 108191379
chr16 29170400 29171022 MYOD GTRD no Muscle (Myoblast) 108191380
chr16 29170406 29171716 ZBTB33 GTRD no Brain (SK-N-SH) 21701847
chr16 29170406 29171716 ZBTB33 GTRD no Brain (SK-N-SH) 108191381
chr16 29170667 29170687 RREB1 JASPAR yes 10246662
chr16 29170670 29170690 RREB1 JASPAR yes 10246663
chr16 29170672 29170692 RREB1 JASPAR yes 10246664
chr16 29170673 29170678 SP1 TRANSFAC yes 10246665
chr16 29170673 29170693 RREB1 JASPAR yes 10246666
Genes associated with rs541320635[chr16:29170673], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More