EnhancerDB
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  3. rs541329048[chr1:171401416]
Enhancers that have rs541329048[chr1:171401416]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs541329048[chr1:171401416]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171401157 171401467 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21349648
chr1 171401219 171401435 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21349649
chr1 171401250 171401506 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21349650
chr1 171401257 171401418 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21349652
chr1 171401263 171401443 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21349653
Genes associated with rs541329048[chr1:171401416], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More