EnhancerDB
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  3. rs541380648[chr1:167759823]
Enhancers that have rs541380648[chr1:167759823]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 167759045 167777775 enh27199
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541380648[chr1:167759823]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 167759373 167759889 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21347283
chr1 167759380 167759910 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21347284
chr1 167759812 167759829 RARA JASPAR yes 32893140
chr1 167759812 167759829 RXRA JASPAR yes 32893141
chr1 167759816 167759829 TFAP2A JASPAR yes 32893142
chr1 167759816 167759829 TFAP2B JASPAR yes 32893143
chr1 167759816 167759829 TFAP2C JASPAR yes 32893144
Genes associated with rs541380648[chr1:167759823], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More