EnhancerDB
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  3. rs541381393[chr18:55943456]
Enhancers that have rs541381393[chr18:55943456]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55922865 55949275 enh17739
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs541381393[chr18:55943456]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55943437 55943457 RREB1 JASPAR yes 110935499
chr18 55943440 55943460 RREB1 JASPAR yes 110935500
chr18 55943442 55943462 RREB1 JASPAR yes 110935501
chr18 55943446 55943456 ZNF740 JASPAR yes 110935503
chr18 55943447 55943457 SP1 JASPAR yes 110935506
chr18 55943448 55943458 SP1 JASPAR yes 110935507
chr18 55943449 55943459 SP1 JASPAR yes 110935509
chr18 55943449 55943469 RREB1 JASPAR yes 110935510
chr18 55943451 55943461 ZNF740 JASPAR yes 110935511
chr18 55943453 55943463 SP1 JASPAR yes 110935512
Genes associated with rs541381393[chr18:55943456], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More