EnhancerDB
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  3. rs541392001[chr11:12697690]
Enhancers that have rs541392001[chr11:12697690]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12695618 12731895 enh13785
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs541392001[chr11:12697690]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12697551 12698075 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21471782
chr11 12697551 12698075 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107959281
chr11 12697564 12698200 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21471783
chr11 12697564 12698200 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107959282
chr11 12697584 12697940 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21471784
chr11 12697584 12697940 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107959283
chr11 12697622 12697942 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107959284
chr11 12697640 12698190 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21471785
chr11 12697640 12698190 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107959285
chr11 12697670 12698080 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21471786
chr11 12697670 12698080 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107959286
chr11 12697688 12697692 YY1 TRANSFAC yes 37463353
chr11 12697688 12697699 CEBPB JASPAR yes 37463354
chr11 12697688 12697703 MEF2C JASPAR yes 37463355
chr11 12697689 12697700 CEBPA JASPAR yes 37463356
chr11 12697689 12697704 MEF2A JASPAR yes 37463357
Genes associated with rs541392001[chr11:12697690], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More