EnhancerDB
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  3. rs541420424[chr2:102333439]
Enhancers that have rs541420424[chr2:102333439]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 102318065 102395755 enh5746
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541420424[chr2:102333439]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 102333427 102333445 NR3C1 JASPAR yes 75830162
chr2 102333431 102333446 FOXA1 JASPAR yes 75830163
chr2 102333433 102333446 POU3F3 JASPAR yes 75830164
chr2 102333434 102333445 FOXB1 JASPAR yes 75830165
chr2 102333434 102333446 POU3F1 JASPAR yes 75830166
Genes associated with rs541420424[chr2:102333439], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More