EnhancerDB
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  3. rs541447924[chr1:44010200]
Enhancers that have rs541447924[chr1:44010200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43989845 44027077 enh11814
Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs541447924[chr1:44010200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 44009528 44011639 TCF7L2 GTRD no Colon (HCT116) 107803030
chr1 44010188 44010202 ZIC1 JASPAR yes 28504241
chr1 44010188 44010203 ZIC3 JASPAR yes 28504242
chr1 44010198 44010203 TFAP2A TRANSFAC yes 28504243
chr1 44010198 44010204 MZF1 JASPAR yes 28504244
Genes associated with rs541447924[chr1:44010200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More