EnhancerDB
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  3. rs541460741[chr19:4370536]
Enhancers that have rs541460741[chr19:4370536]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4365204 4379535 enh4970
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541460741[chr19:4370536]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4367290 4371194 ZNF274 GTRD no Blood (GM12878) 21840839
chr19 4367290 4371194 ZNF274 GTRD no Blood (GM12878) 108370902
chr19 4367394 4372021 ZNF274 GTRD no Blood (GM12878) 21840840
chr19 4367394 4372021 ZNF274 GTRD no Blood (GM12878) 108370903
chr19 4367487 4371346 ZNF274 GTRD no Blood (GM12878) 21840841
chr19 4367487 4371346 ZNF274 GTRD no Blood (GM12878) 108370904
chr19 4367660 4370827 ZNF274 GTRD no Blood (GM12878) 21840842
chr19 4367660 4370827 ZNF274 GTRD no Blood (GM12878) 108370905
chr19 4367981 4371413 ZNF274 GTRD no Blood (GM12878) 21840844
chr19 4367981 4371413 ZNF274 GTRD no Blood (GM12878) 108370907
chr19 4368844 4371208 TCF7L2 GTRD no Colon (HCT116) 21840846
chr19 4368844 4371208 TCF7L2 GTRD no Colon (HCT116) 108370909
chr19 4368905 4371014 TCF7L2 GTRD no Colon (HCT116) 21840851
chr19 4368905 4371014 TCF7L2 GTRD no Colon (HCT116) 108370914
chr19 4368907 4371153 ZNF274 GTRD no Blood (GM12878) 21840852
chr19 4368907 4371153 ZNF274 GTRD no Blood (GM12878) 108370915
chr19 4368922 4371199 TCF7L2 GTRD no Colon (HCT116) 21840857
chr19 4368922 4371199 TCF7L2 GTRD no Colon (HCT116) 108370920
chr19 4368929 4371542 ZNF274 GTRD no Blood (GM12878) 21840859
chr19 4368929 4371542 ZNF274 GTRD no Blood (GM12878) 108370922
chr19 4368930 4370583 ZNF274 GTRD no Blood (GM12878) 21840860
chr19 4368930 4370583 ZNF274 GTRD no Blood (GM12878) 108370923
chr19 4368949 4371589 ZNF274 GTRD no Blood (GM12878) 21840865
chr19 4368949 4371589 ZNF274 GTRD no Blood (GM12878) 108370928
chr19 4368956 4370933 ZNF143 GTRD no Epithelial (MCF-7) 21840869
chr19 4368956 4370933 ZNF143 GTRD no Epithelial (MCF-7) 108370932
chr19 4368985 4371316 TCF7L2 GTRD no Colon (HCT116) 21840875
chr19 4368985 4371316 TCF7L2 GTRD no Colon (HCT116) 108370938
chr19 4368993 4370659 ZNF274 GTRD no Bone Marrow (K562) 21840880
chr19 4368993 4370659 ZNF274 GTRD no Bone Marrow (K562) 108370943
chr19 4369014 4371171 ZNF143 GTRD no Epithelial (MCF-7) 21840888
chr19 4369014 4371171 ZNF143 GTRD no Epithelial (MCF-7) 108370951
chr19 4369047 4371172 ZNF143 GTRD no Epithelial (MCF-7) 21840897
chr19 4369047 4371172 ZNF143 GTRD no Epithelial (MCF-7) 108370960
chr19 4369268 4370668 ZNF143 GTRD no Epithelial (MCF-7) 21840927
chr19 4369268 4370668 ZNF143 GTRD no Epithelial (MCF-7) 108370992
chr19 4369409 4371207 ZNF143 GTRD no Epithelial (MCF-7) 21840933
chr19 4369409 4371207 ZNF143 GTRD no Epithelial (MCF-7) 108370998
chr19 4370524 4370540 ZNF143 JASPAR yes 112169193
chr19 4370525 4370539 PLAG1 JASPAR yes 112169194
chr19 4370535 4370544 ZEB1 JASPAR yes 112169195
chr19 4370536 4370546 FIGLA JASPAR yes 112169196
chr19 4370536 4370546 TCF4 JASPAR yes 112169197
Genes associated with rs541460741[chr19:4370536], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More