EnhancerDB
  1. Home
  2. SNP
  3. rs541521199[chr6:34991677]
Enhancers that have rs541521199[chr6:34991677]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 34986593 35008101 enh23172
Astrocyte Adrenal Embryonic Stem Cell Line (H1-hESC) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541521199[chr6:34991677]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 34991670 34991681 PHOX2A JASPAR yes 101256088
chr6 34991670 34991681 PROP1 JASPAR yes 101256089
chr6 34991673 34991677 TEAD2 TRANSFAC yes 101256090
chr6 34991675 34991687 POU3F1 JASPAR yes 101256091
chr6 34991675 34991687 POU3F2 JASPAR yes 101256092
chr6 34991676 34991686 NFATC3 JASPAR yes 101256093
Genes associated with rs541521199[chr6:34991677], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More