EnhancerDB
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  3. rs541555780[chr2:27928783]
Enhancers that have rs541555780[chr2:27928783]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 27922526 27936875 enh18375
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs541555780[chr2:27928783]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 27928770 27928783 EOMES JASPAR yes 72583170
chr2 27928776 27928790 STAT1 JASPAR yes 72583174
chr2 27928776 27928791 STAT2 JASPAR yes 72583175
chr2 27928776 27928794 IRF2 JASPAR yes 72583176
chr2 27928780 27928791 DMRT3 JASPAR yes 72583177
Genes associated with rs541555780[chr2:27928783], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More