EnhancerDB
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  3. rs541575753[chr5:153743548]
Enhancers that have rs541575753[chr5:153743548]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 153729285 153755555 enh38536
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs541575753[chr5:153743548]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 153743534 153743548 MTF1 JASPAR yes 67029325
chr5 153743543 153743557 ONECUT1 JASPAR yes 67029326
chr5 153743543 153743557 ONECUT2 JASPAR yes 67029327
chr5 153743543 153743557 ONECUT3 JASPAR yes 67029328
chr5 153743544 153743557 DUXA JASPAR yes 67029329
chr5 153743545 153743556 DUX4 JASPAR yes 67029330
chr5 153743546 153743556 PAX3 JASPAR yes 67029331
chr5 153743546 153743556 PAX7 JASPAR yes 67029332
Genes associated with rs541575753[chr5:153743548], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More