EnhancerDB
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  3. rs541576654[chr12:116960855]
Enhancers that have rs541576654[chr12:116960855]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116953469 116985255 enh30011
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs541576654[chr12:116960855]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116959834 116960857 ZNF274 GTRD no Blood (GM12878) 21577191
chr12 116959883 116960956 ZNF274 GTRD no Blood (GM12878) 21577194
chr12 116959916 116960964 ZNF274 GTRD no Blood (GM12878) 21577196
Genes associated with rs541576654[chr12:116960855], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More