EnhancerDB
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  3. rs541577697[chr3:188019775]
Enhancers that have rs541577697[chr3:188019775]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 187996529 188025195 enh48785
Liver Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs541577697[chr3:188019775]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 188019756 188019777 IRF1 JASPAR yes 8469374
chr3 188019758 188019779 IRF1 JASPAR yes 8469377
chr3 188019762 188019777 FOXP1 JASPAR yes 8469378
chr3 188019762 188019783 IRF1 JASPAR yes 8469379
chr3 188019763 188019778 FOXP1 JASPAR yes 8469380
chr3 188019763 188019784 IRF1 JASPAR yes 8469381
chr3 188019764 188019779 FOXP1 JASPAR yes 8469382
chr3 188019766 188019781 FOXP1 JASPAR yes 8469383
chr3 188019767 188019782 STAT2 JASPAR yes 8469384
chr3 188019768 188019783 FOXP1 JASPAR yes 8469385
chr3 188019770 188019790 RREB1 JASPAR yes 8469386
Genes associated with rs541577697[chr3:188019775], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More