EnhancerDB
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  3. rs541582939[chr17:65418387]
Enhancers that have rs541582939[chr17:65418387]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65392925 65424130 enh17321
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs541582939[chr17:65418387]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65416126 65418547 AR GTRD no Prostate (PC-3) 21782165
chr17 65416126 65418547 AR GTRD no Prostate (PC-3) 108285778
chr17 65416680 65419467 ZNF143 GTRD no Epithelial (MCF-7) 21782166
chr17 65416680 65419467 ZNF143 GTRD no Epithelial (MCF-7) 108285779
chr17 65417237 65418680 TEF1 GTRD no Bone (Osteoblast) 108285780
chr17 65417439 65419394 ZNF143 GTRD no Epithelial (MCF-7) 21782167
chr17 65417439 65419394 ZNF143 GTRD no Epithelial (MCF-7) 108285781
chr17 65417847 65418443 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21782169
chr17 65417847 65418443 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108285783
chr17 65417847 65418443 TCF7L2 UCSC Txn Factor no Conserved 108285784
chr17 65417870 65418530 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782170
chr17 65417870 65418530 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285786
chr17 65417891 65418395 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782173
chr17 65417891 65418395 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108285790
chr17 65417896 65418436 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21782174
chr17 65417896 65418436 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108285791
chr17 65417903 65418426 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21782176
chr17 65417903 65418426 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108285793
chr17 65417903 65418667 POLR2A UCSC Txn Factor no Conserved 108285794
chr17 65417908 65418428 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782177
chr17 65417908 65418428 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285795
chr17 65417912 65418508 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782178
chr17 65417912 65418508 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285796
chr17 65417999 65418463 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782191
chr17 65417999 65418463 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108285809
chr17 65418019 65418403 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782194
chr17 65418019 65418403 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108285813
chr17 65418034 65418390 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782199
chr17 65418034 65418390 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285819
chr17 65418043 65419036 ZNF143 GTRD no Epithelial (MCF-7) 21782201
chr17 65418043 65419036 ZNF143 GTRD no Epithelial (MCF-7) 108285822
chr17 65418043 65419292 ZNF143 GTRD no Epithelial (MCF-7) 21782202
chr17 65418043 65419292 ZNF143 GTRD no Epithelial (MCF-7) 108285823
chr17 65418048 65418404 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108285824
chr17 65418057 65418418 NR3C1 UCSC Txn Factor no Conserved 108285825
chr17 65418105 65418461 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782212
chr17 65418105 65418461 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108285841
chr17 65418130 65418400 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21782214
chr17 65418130 65418400 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108285843
chr17 65418203 65418667 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21782216
chr17 65418203 65418667 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108285845
chr17 65418235 65418476 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782218
chr17 65418235 65418476 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108285847
chr17 65418288 65419036 ZNF143 GTRD no Epithelial (MCF-7) 21782219
chr17 65418288 65419036 ZNF143 GTRD no Epithelial (MCF-7) 108285848
chr17 65418305 65419304 ZBTB33 GTRD no Lung (A549) 21782220
chr17 65418305 65419304 ZBTB33 GTRD no Lung (A549) 108285849
chr17 65418374 65419289 ZBTB33 GTRD no Lung (A549) 21782221
chr17 65418374 65419289 ZBTB33 GTRD no Lung (A549) 108285850
Genes associated with rs541582939[chr17:65418387], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More